EPICDB
Experimental ProteomICs DataBase for
Toxoplasma gondii
and
Cryptosporidium parvum
Relevant Publications
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Organism
Select
T. gondii
C. parvum
Experimental Characterization
Select experiment
---
Mass Spec
AntiBody
Either / or
Both / and
Type Of Cell Fraction
All
Membrane Protein Fractions 1DGel LC MS/MS with KCL and Na2C03 wash
Membrane Protein Fractions 1DGel LC MS/MS without KCL and Na2C03 wash
Membrane Protein with Biotinlyation Purification
Membrane Protein Offline - 2DLC MS/MS with KCL and Na2C03 wash
Membrane Protein Offline - 2DLC MS/MS without KCL and Na2C03 wash
Glycoproteins
Cytosolic Protein Fractions
Wall protein identified by MS/MS with ZoomScan
Wall protein identified by MS/MS without ZoomScan
Deglycosylated Wall Protein
Annotations
Pfam domains
---
With
Without
AND Pfam domain
Name:
*
[e.g. ACC_central]
Description:
*
[e.g. Acetyl-CoA]
GO Annotations
---
With
Without
AND GO
Number:
*
[e.g. 0005773]
Term Name (function):
*
[e.g. vacuole]
Transmembrane segments
---
With
Without
Signal peptide
---
With
Without
GPI-anchored Proteins
---
With
Without
Comparative Genomics
---
Similarity found in any other genomes
Unique in comparison to other genomes
Similarity found in NR
Unique in comparison to NR
Similarity found in Human
Unique in comparison to Human
Similarity found in Apicomplexa
Unique in comparison to Apicomplexa
Protein Annotation:
*
[e.g. Protein Transporter]
Gene Predictions and experimental datasets
Select dataset
All
TigrScan
TgGlimmer
TgTwinScan
Release4.0
tgondii-nr
Gene name
*
[e.g. TgTigrScan_1043 or NR-12484153 ]
Interactors
Display Interactor List
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Search by Sequence [BLAST search]
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BLAST e-value
© 2005 Albert Einstein Biodefense Proteomics Research Center